Field Key | Label | Data classes | Brief help |
---|---|---|---|
AAB | Assoc. Aberration | -- | -- |
AAL | Length in a.a. | -- | protein size in amino acids |
AALEN | Peptide length | -- | -- |
ABA | Associated aberration | -- | -- |
ABOD | Antibodies generated | -- | Type of antibody generated |
ABSR | Aberration Record | -- | -- |
ABSSR | Parent Aberration | -- | -- |
ABSTR | Abstract | -- | -- |
ABSY | Symbol | -- | -- |
ACLA | Class of aberration | -- | -- |
ACM | Complements | -- | -- |
AFC | Fails to complement | -- | -- |
AFFY | Affy Oligo | -- | -- |
AFS | Fails to rescue | -- | -- |
AGT | Allele or genotype used | -- | -- |
ALC | Allele class | -- | Class of allele, including wild-type, loss of function, etc., a controlled vocabulary |
ALER | Allele Record | -- | an allele record |
ALETAB | Allele table | -- | -- |
ALSO | Also published as | -- | -- |
ALTSQ | Alternative sequence | -- | -- |
AM | Allelism info. | -- | information concerning possible allelism between genes |
AMD | Deletes/disrupts | -- | information on allelism indicating genes deleted or disrupted by this one |
AMDD | Does not delete/disrupt | -- | information on allelism indicating genes not deleted or disrupted by this one |
AMDP | Duplicated for | -- | information on allelism indicating genes duplicated |
AMIS | Misc. allele information | -- | -- |
AMND | Not duplicated for | -- | -- |
AMP | Partially disrupts | -- | information on allelism indicating genes partially deleted or disrupted by this one |
AMPD | Partially duplicated for | -- | -- |
AMSO | Rescue and compl. info. | -- | -- |
ANRB | Not rescued by | -- | -- |
APC | Partially complements | -- | -- |
APR | Partially rescues | -- | -- |
APRB | Partially rescued by | -- | -- |
ARB | Rescued by | -- | -- |
ARG2 | FlyBase gene annotation | -- | -- |
ARGS | FlyBase gene annotation | -- | Annotated reference gene sequence, showing exons, mRNA, coding sequence, transposon insertion sites, and other sequence features of a gene |
ARM | Chromosome arm | -- | -- |
ARS | Rescues | -- | -- |
ASAL | Associated allele | -- | -- |
ASBA | Associated balancer | -- | -- |
ASCO | Associated construct | -- | -- |
ASCRGN | Reflects expression of | -- | gene whose promoter region drives the expression of a enhancer trap or reporter construct |
ASGN | Associated gene | -- | The polypeptide or transcript reported is the product of this gene. |
ASM | Assay mode | -- | assay used to obtain expression pattern data |
ASPP | Associated polypeptide | -- | proteins known to be encoded by given transcript |
ASQ | Genomic sequence analysis | -- | Preliminary gene structures and adjacent genes and region (GadFly report) |
ASTI | Associated insertion | -- | -- |
ASTP | Associated transposon | -- | -- |
ASTR | Associated transcript | -- | transcripts that encode a given protein |
ASYM | Symbol | -- | an abbreviated, unique, name for an allele (gene variant) |
AU | Author | -- | -- |
BFD | BFD Line | -- | -- |
BGV | Balancer/ Genotype variant | -- | -- |
BGVR | Variant Record | -- | -- |
BGVSY | Symbol | -- | -- |
BI | Biosis | -- | -- |
BIP | Breakpoints inherited from progenitors | -- | -- |
BLOC | Sequence map | -- | -- |
BM | Aberration info. | -- | -- |
BMD | Disrupted in | -- | -- |
BMDD | Not disrupted in | -- | -- |
BMDP | Duplicated in | -- | -- |
BMND | Not duplicated in | -- | -- |
BMP | Partially disrupted in | -- | -- |
BMPD | Partially duplicated in | -- | -- |
BODP | Expression data | -- | detailed expression pattern data for transcripts and polypeptides |
BPT | Breakpoints | -- | Locations of the aberration on the cytological (polytene chromosome) map. To the extent possible, the computed range is consistent with all data known to FlyBase. The computed location may be presented as a range of uncertainty. |
BSN | Balancer short name | -- | -- |
BURL | Database link base | -- | -- |
CC | Comments | -- | -- |
CCL | Construct type | -- | -- |
CCLOC | Cytological location | -- | -- |
CCM | Comments on cytology | -- | -- |
CDNA | cDNA | -- | detailed information on cDNAs |
CDS | Coding sequence | -- | -- |
CEL | GO:Cellular component | -- | subcellular location of gene product, a controlled vocabulary |
CGSYM | CG Symbol | -- | -- |
CH | Characteristics | -- | -- |
CLA | Class of gene | -- | classification of the genetic element, if other than gene, including mitochondrial gene, transposon, non coding RNA gene, and others; a controlled vocabulary |
CLNR | Clone Record | -- | -- |
CLNSR | Clone | -- | -- |
CLOC | Cytogenetic map | -- | Location of the gene on the cytological (polytene chromosome) map. To the extent possible, the computed range is consistent with all data known to FlyBase. The computed location may be presented as a range of uncertainty. |
CLOCC | Computed cytology | -- | -- |
CMT | Comments | -- | -- |
CNM | Common Name | -- | -- |
CNS | Carried in construct | -- | Transposon or construct that carries allele |
CO | Coden | -- | -- |
COR | Comments on origin | -- | -- |
CPW | Library plate-well | -- | -- |
CS | Cloning site | -- | -- |
CSQ | Sequence | -- | -- |
CTG | Physical contig | -- | -- |
CTSYM | Transcript symbol | -- | -- |
CVBODP | Expression pattern | -- | subcellular region(s) of gene product localization, a controlled vocabulary |
CVBODPC | Expression pattern comment | -- | -- |
CVCEL | Cell location (CV) | -- | -- |
CVEC | Vector | -- | -- |
CYA | Associated cytology | -- | comments on cytology associated with allele |
CYC | Notes on cytogenetic map | -- | comments on cytological location |
DBA | DNA/RNA sequences | -- | nucleic acid sequence databank and other DNA accession number |
DBAF | Flanking sequence | -- | -- |
DBID | Database name | -- | -- |
DEC | Descendant | -- | -- |
DES | Description | -- | -- |
DHO | Probable reference ortholog | -- | "Homologous" genes in other species of drosophilid |
DIS | Discoverer | -- | person discovering the gene or other item |
DOMAIN | Domain | -- | -- |
DT | Date | -- | Date record entered or updated |
ENL | Left entity | -- | -- |
ENR | Right entity | -- | -- |
ENZ | GO:Molecular function | -- | enzyme name and enzyme commission number, a controlled vocabulary |
EPA | Tissue/Position | -- | -- |
EPAT | Expression pattern | -- | -- |
EPATR | Expression pattern | -- | -- |
EPP | Pattern | -- | -- |
EPT | Stage | -- | -- |
ER | Related publication | -- | -- |
EST | EST | -- | -- |
EVD | Evidence | -- | -- |
EVDR | Evidence Record | -- | -- |
EXNSQ | Exon composition | -- | list of the exons that make up a particular transcript |
ExpatTable | Expression pattern | -- | -- |
FBARGS | Annotated reference sequence | -- | -- |
FBDARTS | GenBank sequence report | -- | -- |
FGD | Formalized genetic data | -- | -- |
FI | File index | -- | -- |
FLQ | Flanking sequence | -- | -- |
FNC | GO:Biological process | -- | function(s) of gene product, a controlled vocabulary |
FSQ | Foreign sequence | -- | -- |
GADR | Annotation Record | -- | -- |
GADSR | Genome Annotation | -- | -- |
GENR | Gene Record | -- | Gene record |
GENSR | Parent Gene | -- | Gene sub-record |
GIA | Genetic interaction (effect, anatomy) | -- | -- |
GIA2 | Genetic interaction (anatomy, effect) | -- | -- |
GIC | Genetic interaction (effect, class) | -- | -- |
GIC2 | Genetic interaction (class, effect) | -- | -- |
GII | Genetic interaction info. | -- | -- |
GLC | Comments on genetic locn. | -- | comments on, or alternative, genetic location |
GLOC | Recombination map | -- | Location of the gene on the genetic (recombination) map. |
GO | Gene Ontology | -- | -- |
GOTERM | GO Term | -- | -- |
GPD | Gene product | -- | -- |
GSNA | Short name | -- | -- |
GSYM | Symbol | -- | an abbreviated, unique, name for a gene |
GeneInterTable | Genetic Interactions | -- | -- |
HG | Similar genes | -- | Cross-reference to non-Drosophila homolog(s) or analogs |
HGTAB | Similar genes table | -- | -- |
HITS | Positive PCR assay | -- | -- |
IBAL | Usable as balancer | -- | -- |
ICC | Comment | -- | -- |
ICL | Insertion class | -- | -- |
ICO | Database icon | -- | -- |
ID | FlyBase ID | -- | FlyBase identifier number, a unique value for each data record |
ID2 | Secondary ID | -- | secondary or obsolete FlyBase identifier number |
IFL | Interactive Fly | -- | link to the Interactive Fly document for this gene |
INSR | Insertion | -- | -- |
INSY | Insertion synonym | -- | -- |
IPRO | InterPro motifs | -- | -- |
ISBN | Isbn | -- | -- |
ISS | Issue | -- | -- |
ITP | Insertion's transposon type | -- | -- |
JR | Journal | -- | -- |
KLOC | Computed kilobase location | -- | -- |
LG | Language | -- | -- |
LGA | Addn. lang.s | -- | -- |
LIB | Library class | -- | -- |
LKAC | Database link accession | -- | -- |
LKFL | Database link field | -- | -- |
LKHE | Database link help | -- | -- |
LKID | Database link id | -- | -- |
LKNA | Database link name | -- | -- |
LOCB | Localization basis | -- | -- |
LOI | Location inferred from insertion in | -- | -- |
LOST | Availability | -- | -- |
MABST | Abstract | -- | -- |
MD | Molecular data | -- | molecular information for genes and alleles |
MED | PubMed | -- | PubMed (MEDLINE) accession number and abstract, if available, from the NLM PubMed server |
MEDAB | Abstract | -- | -- |
MK | Markers | -- | -- |
MMP | Molecular map | -- | Kilobase-level resolution maps curated from publications |
MOD | Modification of progenitor | -- | -- |
MRK | Body part marker | -- | cell type for which this gene product is a useful marker, a controlled vocabulary |
MU | Mutagen | -- | origin of, or mutagen used to produce. this allele, a controlled vocabulary |
NAF | DNA Features | -- | general characteristics of DNA sequence, a controlled vocabulary |
NAM | Full name | -- | full name of gene, allele or other item |
NB | Neighbor | -- | -- |
NBR | Neighbor Record | -- | -- |
NBV | Neighbor value | -- | -- |
NCO | New cytological order | -- | -- |
OAB | Genetic data about other aber. | -- | -- |
OLAP | Overlaps | -- | -- |
OP | Offprint | -- | Indicates a copy of this article is in the Drosophila Offprint Collection maintained by FlyBase (Cambridge) |
OPVR | External database | -- | -- |
OPVSR | External database | -- | -- |
ORI | Orientation | -- | -- |
OTH | Other information | -- | miscellaneous information on genes and alleles |
OURL | Database link | -- | -- |
OURLR | External database links | -- | -- |
OURLR1 | Database link SR | -- | -- |
OURLSR | External database links | -- | -- |
PAC | Protein sequences | -- | protein database accession numbers |
PB | Publisher | -- | -- |
PCL | Cell loc. summary | -- | subcellular region(s) of gene product localization |
PDOM | Protein domains | -- | Protein domain information |
PED | Position-effect data | -- | -- |
PEPST | Peptide Status | -- | -- |
PEV | Position-effect variegation | -- | aberrations causing position-effect variegation of gene, a controlled vocabulary |
PEVD | Dominant PEV in | -- | aberrations causing Dominant position-effect variegation of gene, a controlled vocabulary |
PEVN | No PEV in | -- | No position-effect variegation of gene, a controlled vocabulary |
PEVR | Recessive PEV in | -- | aberrations causing Recessive position-effect variegation of gene, a controlled vocabulary |
PG | Pages | -- | -- |
PHC | Phenotypic class | -- | phenotypic class into which the allele falls.A genotype in curly brackets indicates the phenotypic class is dependent on the second genotype in the brackets. |
PHI | Mutant phenotype | -- | phenotypic information on alleles |
PHM | Phenotype manifest in | -- | the body part affected by the mutant allele, controlled vocabulary. |
PHP | Phenotypic info. | -- | phenotypic information on genes |
PHS | Status | -- | -- |
POL | Polymorphic variant | -- | other polypeptides that may be variants of given polypeptide |
PPB | Place pub. | -- | -- |
PPC | Population comments | -- | Comments on population and polymorphism data |
PPR | Polypeptide Record | -- | -- |
PPS | Population info | -- | -- |
PPSR | Polypeptide | -- | -- |
PRG | Progenitor | -- | progenitor allele or chromosome if relevant to allele |
PSZ | Protein size (kD) | -- | protein size in kilodaltons (kD) |
PT | Part | -- | -- |
PTD | Protein & Transcript | -- | Detailed information on transcripts and polypeptides |
PTR | Protein & Transcript | -- | -- |
PTRR | Protein & Transcript Record | -- | -- |
PhenoTable | Allele phenotypes | -- | -- |
ProtTransTable | Proteins & Transcripts | -- | -- |
RCI | Related transgene constructs and insertions | -- | -- |
RCIR | Related transgene constructs and insertions | -- | -- |
RDID | Ref. | -- | FlyBase identifier number for Attributed data |
RDL | Data from reference | -- | -- |
RDL1 | Data from reference | -- | -- |
RDLSR | Data from reference | -- | Table of data reports attributed to this reference |
REF | References | -- | -- |
REFDR | Ref. Data Record | -- | -- |
REFDSR | Data from ref. | -- | -- |
REFF | Reference | -- | -- |
REFM | Mini ref. | -- | -- |
REFR | Reference Record | -- | -- |
REFTAB | Reference table | -- | -- |
RESZ | Record size | -- | -- |
RETE | Table Entry | -- | -- |
REV | Recent reviews | -- | -- |
RG | Ring | -- | -- |
RL | Ref. list | -- | -- |
RLR | References | -- | -- |
RLSR | References | -- | -- |
RNAT | RNA type | -- | class of transcript, such as mRNA, tRNA, rRNA, etc.; a controlled vocabulary |
RPA | Rep. protein sequence | -- | Most representative protein sequence |
RPTC2 | Available reports | -- | Sections of report: Synopsis, just the salient points, Abridged, a reduced report, Full, for all details, GadFly, gene structures and adjacent genes and region, Interactive Fly report associated with this gene, Alleles, a table of alleles, Proteins & transcripts, associated products, Recent reviews, review publications for this record, References, listing all publications for a data record, Sequences & similarities, links to sequence and species homology data, Synonyms, other names and symbols for this item, Attributed data, data attributed to particular publications. Recently updated data that has not yet been integrated with the full set. Italics indicate a section is contained in the current report. |
RPTCAN | Available reports | -- | -- |
RPTCONTENT | Available reports | -- | Section of report: Synopsis, just the salient points, Abridged, a reduced report, Full, for all details, GadFly, gene structures and adjacent genes and region, Interactive Fly report associated with this gene, Alleles, a table of alleles, Proteins & transcripts, associated products, Recent reviews, review publications for this record, References, listing all publications for a data record, Sequences & similarities, links to sequence and species homology data, Synonyms, other names and symbols for this item, Attributed data, data attributed to particular publications. Recently updated data that has not yet been integrated with the full set. Italics indicate a section is contained in the current report. |
RPTL | Data report | -- | -- |
RS | Restriction site | -- | -- |
RSQ | Rep. DNA sequence | -- | Most representative DNA sequence |
SCAF | Scaffold | -- | -- |
SEG | Segment | -- | -- |
SEP | Separable component | -- | -- |
SEPR | Sep. component Record | -- | -- |
SER | Series | -- | -- |
SGTP | Segment type | -- | -- |
SK | Stocks | -- | Drosophila stock flies with this gene or entity, available from stock centers |
SKC | Stocks count | -- | -- |
SPSY | Symbol | -- | -- |
SQ | Sequence | -- | -- |
SQLEN | mRNA length | -- | -- |
STS | STS | -- | -- |
STSNAM | Name | -- | -- |
STSR | STS Record | -- | -- |
SUMX | Summary | -- | a generated text summary of the data |
SYM | Symbol | -- | an abbreviated, unique name |
SYN | Synonyms | -- | alternate and discontinued symbols and names for this item. |
TCC | Comments | -- | -- |
TCH | Characteristics | -- | -- |
TCL | Description | -- | -- |
TCSR | Transcript | -- | -- |
TCTP | Transposon construct type | -- | -- |
TE | Transposable el. data | -- | transposable element data |
TFT | Feature | -- | -- |
TGT | Genotype | -- | -- |
TI | Title | -- | -- |
TIR | Insertion Record | -- | -- |
TMPLCONT | Report content | -- | -- |
TP | Type | -- | Reference type: abstract, book, review, etc. |
TPFBMMP | Molecular map | -- | -- |
TPFBSQ | Transposon sequence | -- | -- |
TPR | Transposon Record | -- | -- |
TPSY | Transposon synonym | -- | -- |
TPU | Uses | -- | -- |
TRL | Length (Kb) | -- | The size in kilobases of transcript or transposon |
TRN | Responsible transposon | -- | transposon or insertion chromosome associated with allele |
TRNA | Transposon insertions | -- | -- |
TRR | Transcript Record | -- | -- |
TRREC | AnnoTranscript Record | -- | -- |
TRRECSR | Transcript | -- | -- |
TRSR | Transposon | -- | -- |
UAB | Useful aneuploid aberrations | -- | -- |
VCL | Is valid record | -- | -- |
VERS | Release vers. | -- | -- |
VL | Volume | -- | -- |
VPR | 5' experiment info | -- | Has the 5' end of transcript been experimentally determined? |
WT | Wild-type function | -- | information on wild-type function |
WTI | Interacts genetically with | -- | information on gene interactions |
XDA | Expression data available | -- | -- |
YR | Year | -- | -- |
ZR | Zool. Rec. | -- | -- |
env | -- | -- | -- |
fbsym | FlyBase symbol | -- | -- |
self | -- | -- | -- |